Cytobank Enterprise

Cytobank is a cloud-based platform that offers machine-learning assisted analysis of high dimensional single cell data. Enterprise licenses provide access to a private cloud and are designed to meet the needs of larger research teams in institutions or biopharma R&D or clinical research organizations. Different license types are available depending on your needs. Powerful dimensionality reduction, clustering and prediction algorithms accelerate your research.  Use the Cytobank platform to manage and archive flow and mass cytometry or other single cell data and to easily collaborate with colleagues across disciplines and geographies from any web-based device.


For Research Use Only. Not for use in diagnostic procedures.

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Cytobank Enterprise private cloud for ML-assisted data analysis and secure storage and archive

Explore Cytobank Enterprise Models

Compatibility Loads any listmode file compliant with FCS standard up through version 3.1. DROP is able to import any numeric data in a text delimited (comma, semicolon, tab) format.
Operating System or Supported Browsers Firefox, Chrome, and Safari. A minimum 50 Mbps download speed and 10 Mbps upload speed for best performance.
Plot Types Contour Plots, Density Plots, Dot Plots, Histograms, Overlay Plots, Heatmap
Gates CITRUS, FlowSOM, SPADE, viSNE
Statistics Median, Mean, Coefficient of Variation (CV), Percent of Population, Standard Deviation (SD), Variance, Minimum, Maximum, Event Count, Event Count Ratio, Channel Ranges, Geometric Mean, Percent in Gate (Literal)
License Type Enterprise, Commerical
Number of Users 1
License Term 3 years

Content and Resources

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Cytobank Workflow - Unbiased Discovery or Guided Analysis Using Prior Knowledge? Flyer: Which algorithm to use for each research question? How to get the most out of your data.
Cytobank Enterprise Administrator User Manual Explanation of the most important functionalities for Cytobank Enterprise Administrators
Cytobank Single Cell Big Picture Brochure Cytobank provides an established cloud-based platform that accelerates research productivity by enabling you to analyze and visualize multiple complex single-cell data sets efficiently and effectively.
Using Standardized Dry Antibody Panels for Flow Cytometry in the Assessment of Altered Immune Profiles in Response to SARS-CoV2 Infection In order to identify early indicators of disease severity in SARS-CoV2-infection, the proportions of well-established immune cell phenotypes have been subject to extensive research, utilizing flow cytometry as a core technology1-3. In order to ensure comparable and consistent results in the massively multi-institutional research setting of a global pandemic, the use of standardized antibody panels and procedures, as demonstrated by The ONE Study4-6, is a promising approach that also can lower technical barriers
An Automated FCS File Import and FlowSOM run in the Cytobank Platform Using the Application Programming Interface Learn step-by-step how to use an R script to automatically upload files to the Cytobank platform and perform an automated FlowSOM run, all via the API.

Technical Documents